BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030H03LP1|AL429294
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1131 1722 0.0
>3x_Contig1131
Length = 5958
Score = 1722 bits (866), Expect = 0.0
Identities = 873/878 (99%)
Strand = Plus / Plus
Query: 1 taatgtaggkcgtaattcacatcactaggatatccttcattagccttatctccttgccac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 taatgtagggcgtaattcacatcactaggatatccttcattagccttatctccttgccac 4362
Query: 61 tcggaatattttccgattccttctattcctcgagtctaattagaaagtgaactttcccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 tcggaatattttccgattccttctattcctcgagtctaattagaaagtgaactttcccat 4422
Query: 121 gaaaactcttggcacagtatatttaaacattcacaccggaacatagacattgtacaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4423 gaaaactcttggcacagtatatttaaacattcacaccggaacatagacattgtacaaaag 4482
Query: 181 gagaaaagaagttcaagcaaaacaccccccatcttaccatcatgctaggtggtacagcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4483 gagaaaagaagttcaagcaaaacaccccccatcttaccatcatgctaggtggtacagcga 4542
Query: 241 tggctgatactagttggttaaaaccgttggtgtctcagttcaactgtgaggggtacttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4543 tggctgatactagttggttaaaaccgttggtgtctcagttcaactgtgaggggtacttgt 4602
Query: 301 tgaacagtggcagtttccgatcggtgaattcactcatcaatgatacagatatctggaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4603 tgaacagtggcagtttccgatcggtgaattcactcatcaatgatacagatatctggaacc 4662
Query: 361 agaccatgaactatccagcatggtacgcgaactgtacggatagcgatgaaacgtcgatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4663 agaccatgaactatccagcatggtacgcgaactgtacggatagcgatgaaacgtcgatat 4722
Query: 421 tcatcgatgcgttggctgacttgtccaaggaattcagttttgttcctcagaaaaacgtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4723 tcatcgatgcgttggctgacttgtccaaggaattcagttttgttcctcagaaaaacgtgt 4782
Query: 481 ttatcagtgggaaccttgtgatcgctttcgttctatccggagtatgcatcggaggttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4783 ttatcagtgggaaccttgtgatcgctttcgttctatccggagtatgcatcggaggttgga 4842
Query: 541 tgttattcttacttttatyttyactaccatctacaaaccataacaggcagaaacgtatgg 600
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 4843 tgttattcttacttttatttttactaccatctacaaaccataacaggcagaaacgtatgg 4902
Query: 601 tgcatttgtacgtgttgtatttctccatagtccaaacggtcatttggaagaagactaacg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4903 tgcatttgtacgtgttgtatttctccatagtccaaacggtcatttggaagaagactaacg 4962
Query: 661 atgaggtctttgaaatacagtatattagtaactatcaagattctctggcatttgacaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4963 atgaggtctttgaaatacagtatattagtaactatcaagattctctggcatttgacaaaa 5022
Query: 721 tgatattggaagttacatggtctaaagtggtacgattcttctcgttggtgttttgtaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5023 tgatattggaagttacatggtctaaagtggtacgattcttctcgttggtgttttgtaatg 5082
Query: 781 tgaattggatcattgtcatatattatctctgctctcggagtagggggatatcccggcgtt 840
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5083 tgaattggatcattgtcatatattatctctgctctcggagtaggggaatatcccggcgtt 5142
Query: 841 ggagacggtctatgcccaggtggctcagagatttawat 878
||||||||||||||||||||||||||||||||||| ||
Sbjct: 5143 ggagacggtctatgcccaggtggctcagagatttaaat 5180
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5361
Number of Sequences: 1807
Number of extensions: 5361
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)